From da00d23be149727c321fd0311db5e91c384601c8 Mon Sep 17 00:00:00 2001 From: 082aa0aa9507b80b621099010e33de9d <082aa0aa9507b80b621099010e33de9d@app-learninglab.inria.fr> Date: Tue, 2 Jul 2024 18:14:33 +0000 Subject: [PATCH] Update journal/Readme.md --- journal/Readme.md | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/journal/Readme.md b/journal/Readme.md index 07fdb9c..c42bf12 100644 --- a/journal/Readme.md +++ b/journal/Readme.md @@ -26,6 +26,9 @@ _This notebook is created due to mission from this module_ * workflow environments: [Galaxy](https://galaxyproject.org/learn/advanced-workflow/), [Kepler](https://kepler-project.org/), [Taverna](https://en.wikipedia.org/wiki/Apache_Taverna), [Pegasus](https://pegasus.isi.edu/about/),[VisTrails](https://www.vistrails.org//index.php/Main_Page), [Collective Knowledge](https://ck.readthedocs.io/en/v2.5.8/src/first-steps.html). +Besides: +Light-weight wf: [dask](python), [drake](R), [swift](molecular biology), [snakemake](https://snakemake.readthedocs.io/) like make but more expressive and in python +Hybrids: [SOS-notebook](https://vatlab.github.io/sos-docs/) * Tool for evn control: [Docker container](https://www.docker.com/resources/what-container/), [GUIX](https://guix.gnu.org/) and [Nix/NixOS](https://nixos.org/) @@ -39,7 +42,7 @@ Docker often wins for immediate deployment and ease of use, while Nix shines for Short summary: -* workflow: +* workflow: * software environment controller: GUIX, NIX * article: HAL, Arxiv * data: FigShare. Zenodo -- 2.18.1