diff --git a/module3/exo1/analyse-syndrome-grippal.ipynb b/module3/exo1/analyse-syndrome-grippal.ipynb index 472593a930f30cece8b3b95d31c7a372d58842e4..4914806783209e25b70fabd512a4fbc16fe51b37 100644 --- a/module3/exo1/analyse-syndrome-grippal.ipynb +++ b/module3/exo1/analyse-syndrome-grippal.ipynb @@ -29,12 +29,12 @@ }, { "cell_type": "code", - "execution_count": 2, + "execution_count": 20, "metadata": {}, "outputs": [], "source": [ "data_url = \"https://www.sentiweb.fr/datasets/all/inc-3-PAY.csv\" # \"http://www.sentiweb.fr/datasets/incidence-PAY-3.csv\"\n", - "data_locale = r'./mod3_exo3_donnes_brutes.csv'" + "data_locale = r'./mod3_exo1_donnes_brutes.csv'" ] }, { @@ -61,7 +61,7 @@ }, { "cell_type": "code", - "execution_count": 3, + "execution_count": 18, "metadata": {}, "outputs": [ { @@ -70,8 +70,8 @@ "text": [ "completeName : ./ , influenza-like-illness-analysis.org\n", "completeName : ./ , influenza-like-illness-analysis.Rmd\n", + "completeName : ./ , mod3_exo1_donnes_brutes.csv\n", "completeName : ./ , influenza-like-illness-analysis.ipynb\n", - "completeName : ./ , mod3_exo3_donnes_brutes.csv\n", "completeName : ./ , analyse-syndrome-grippal.Rmd\n", "completeName : ./ , analyse-syndrome-grippal.org\n", "completeName : ./ , analyse-syndrome-grippal.ipynb\n", @@ -88,7 +88,7 @@ }, { "cell_type": "code", - "execution_count": 11, + "execution_count": 21, "metadata": {}, "outputs": [ { @@ -1053,13 +1053,13 @@ "[2128 rows x 10 columns]" ] }, - "execution_count": 11, + "execution_count": 21, "metadata": {}, "output_type": "execute_result" } ], "source": [ - "raw_data = pd.read_csv(data_url, skiprows=1) # était data_url avec skiprows= 1\n", + "raw_data = pd.read_csv(data_locale, skiprows=0) # était data_url avec skiprows= 1\n", "# exécuté une fois puis commenté \n", "# raw_data.to_csv('./mod3_exo1_donnes_brutes.csv', index = False)\n", "raw_data" @@ -1074,7 +1074,7 @@ }, { "cell_type": "code", - "execution_count": 12, + "execution_count": 22, "metadata": {}, "outputs": [ { @@ -1136,7 +1136,7 @@ "1891 FR France " ] }, - "execution_count": 12, + "execution_count": 22, "metadata": {}, "output_type": "execute_result" } @@ -1154,7 +1154,7 @@ }, { "cell_type": "code", - "execution_count": 13, + "execution_count": 23, "metadata": {}, "outputs": [ { @@ -2119,7 +2119,7 @@ "[2127 rows x 10 columns]" ] }, - "execution_count": 13, + "execution_count": 23, "metadata": {}, "output_type": "execute_result" } @@ -2149,7 +2149,7 @@ }, { "cell_type": "code", - "execution_count": 14, + "execution_count": 24, "metadata": {}, "outputs": [], "source": [ @@ -2179,7 +2179,7 @@ }, { "cell_type": "code", - "execution_count": 15, + "execution_count": 25, "metadata": {}, "outputs": [ { @@ -3159,7 +3159,7 @@ "[2127 rows x 10 columns]" ] }, - "execution_count": 15, + "execution_count": 25, "metadata": {}, "output_type": "execute_result" } @@ -3187,7 +3187,7 @@ }, { "cell_type": "code", - "execution_count": 16, + "execution_count": 26, "metadata": {}, "outputs": [ { @@ -3215,7 +3215,7 @@ }, { "cell_type": "code", - "execution_count": 17, + "execution_count": 27, "metadata": {}, "outputs": [ { @@ -3225,7 +3225,7 @@ "traceback": [ "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m", "\u001b[0;31mTypeError\u001b[0m Traceback (most recent call last)", - "\u001b[0;32m\u001b[0m in \u001b[0;36m\u001b[0;34m\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0msorted_data\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m'inc'\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mplot\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m", + "\u001b[0;32m\u001b[0m in \u001b[0;36m\u001b[0;34m\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0msorted_data\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m'inc'\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mplot\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m", "\u001b[0;32m/opt/conda/lib/python3.6/site-packages/pandas/plotting/_core.py\u001b[0m in \u001b[0;36m__call__\u001b[0;34m(self, kind, ax, figsize, use_index, title, grid, legend, style, logx, logy, loglog, xticks, yticks, xlim, ylim, rot, fontsize, colormap, table, yerr, xerr, label, secondary_y, **kwds)\u001b[0m\n\u001b[1;32m 2501\u001b[0m \u001b[0mcolormap\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mcolormap\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mtable\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mtable\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0myerr\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0myerr\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 2502\u001b[0m \u001b[0mxerr\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mxerr\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mlabel\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m,\u001b[0m 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"outputs": [ + { + "ename": "TypeError", + "evalue": "Empty 'DataFrame': no numeric data to plot", + "output_type": "error", + "traceback": [ + "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m", + "\u001b[0;31mTypeError\u001b[0m Traceback (most recent call last)", + "\u001b[0;32m\u001b[0m in \u001b[0;36m\u001b[0;34m\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0msorted_data\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m'inc'\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;36m200\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mplot\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m", + "\u001b[0;32m/opt/conda/lib/python3.6/site-packages/pandas/plotting/_core.py\u001b[0m in \u001b[0;36m__call__\u001b[0;34m(self, kind, ax, figsize, use_index, title, grid, legend, style, logx, logy, loglog, xticks, yticks, xlim, ylim, rot, fontsize, colormap, table, yerr, xerr, label, secondary_y, **kwds)\u001b[0m\n\u001b[1;32m 2501\u001b[0m \u001b[0mcolormap\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mcolormap\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mtable\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mtable\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0myerr\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0myerr\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 2502\u001b[0m \u001b[0mxerr\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mxerr\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mlabel\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0msecondary_y\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0msecondary_y\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2503\u001b[0;31m **kwds)\n\u001b[0m\u001b[1;32m 2504\u001b[0m \u001b[0m__call__\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m__doc__\u001b[0m \u001b[0;34m=\u001b[0m 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1927\u001b[0;31m **kwds)\n\u001b[0m\u001b[1;32m 1928\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1929\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n", + "\u001b[0;32m/opt/conda/lib/python3.6/site-packages/pandas/plotting/_core.py\u001b[0m in \u001b[0;36m_plot\u001b[0;34m(data, x, y, subplots, ax, kind, **kwds)\u001b[0m\n\u001b[1;32m 1727\u001b[0m \u001b[0mplot_obj\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mklass\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mdata\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0msubplots\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0msubplots\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0max\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0max\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkind\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mkind\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mkwds\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1728\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 1729\u001b[0;31m 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364\u001b[0m raise TypeError('Empty {0!r}: no numeric data to '\n\u001b[0;32m--> 365\u001b[0;31m 'plot'.format(numeric_data.__class__.__name__))\n\u001b[0m\u001b[1;32m 366\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 367\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mdata\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mnumeric_data\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n", + "\u001b[0;31mTypeError\u001b[0m: Empty 'DataFrame': no numeric data to plot" + ] + } + ], "source": [ "sorted_data['inc'][-200:].plot()" ]