{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "# Autour du SARS-CoV-2 (Covid-19)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## le 31 aout 2022 - blandine" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "Le but de ce document est de créer des graphiques permettant de suivre l'évolution de l'épidémie du COVID. " ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "### Déclaration des librairies utilisées dans ce document" ] }, { "cell_type": "code", "execution_count": 2, "metadata": {}, "outputs": [], "source": [ "%matplotlib inline\n", "import matplotlib.pyplot as plt\n", "import pandas as pd" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "### Import des données\n", "Nous allons utiliser les données de Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE) qui ont été mises à disposition sur GitHub. \n", "C’est plus particulièrement sur les données time_series_covid19_confirmed_global.csv (des suites chronologiques au format csv) disponibles à l’adresse : https://raw.githubusercontent.com/CSSEGISandData/COVID-19/master/csse_covid_19_data/csse_covid_19_time_series/time_series_covid19_confirmed_global.csv. " ] }, { "cell_type": "code", "execution_count": 3, "metadata": {}, "outputs": [ { "data": { "text/html": [ "
| \n", " | Province/State | \n", "Country/Region | \n", "Lat | \n", "Long | \n", "1/22/20 | \n", "1/23/20 | \n", "1/24/20 | \n", "1/25/20 | \n", "1/26/20 | \n", "1/27/20 | \n", "... | \n", "8/23/22 | \n", "8/24/22 | \n", "8/25/22 | \n", "8/26/22 | \n", "8/27/22 | \n", "8/28/22 | \n", "8/29/22 | \n", "8/30/22 | \n", "8/31/22 | \n", "9/1/22 | \n", "
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | \n", "NaN | \n", "Afghanistan | \n", "33.93911 | \n", "67.709953 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "... | \n", "191247 | \n", "191585 | \n", "191967 | \n", "191967 | \n", "191967 | \n", "192463 | \n", "192906 | \n", "193004 | \n", "193250 | \n", "193520 | \n", "
| 1 | \n", "NaN | \n", "Albania | \n", "41.15330 | \n", "20.168300 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "... | \n", "326787 | \n", "327232 | \n", "327607 | \n", "327961 | \n", "328299 | \n", "328515 | \n", "328571 | \n", "329017 | \n", "329352 | \n", "329615 | \n", "
| 2 | \n", "NaN | \n", "Algeria | \n", "28.03390 | \n", "1.659600 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "... | \n", "269971 | \n", "270043 | \n", "270097 | \n", "270145 | \n", "270175 | \n", "270194 | \n", "270235 | \n", "270272 | \n", "270304 | \n", "270359 | \n", "
| 3 | \n", "NaN | \n", "Andorra | \n", "42.50630 | \n", "1.521800 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "... | \n", "45975 | \n", "46027 | \n", "46027 | \n", "46027 | \n", "46027 | \n", "46027 | \n", "46027 | \n", "46027 | \n", "46027 | \n", "46027 | \n", "
| 4 | \n", "NaN | \n", "Angola | \n", "-11.20270 | \n", "17.873900 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "... | \n", "102636 | \n", "102636 | \n", "102636 | \n", "102636 | \n", "102636 | \n", "102636 | \n", "102636 | \n", "102636 | \n", "102636 | \n", "102636 | \n", "
5 rows × 958 columns
\n", "| \n", " | Country/Region | \n", "1/22/20 | \n", "1/23/20 | \n", "1/24/20 | \n", "1/25/20 | \n", "1/26/20 | \n", "1/27/20 | \n", "1/28/20 | \n", "1/29/20 | \n", "1/30/20 | \n", "... | \n", "8/23/22 | \n", "8/24/22 | \n", "8/25/22 | \n", "8/26/22 | \n", "8/27/22 | \n", "8/28/22 | \n", "8/29/22 | \n", "8/30/22 | \n", "8/31/22 | \n", "9/1/22 | \n", "
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | \n", "Belgium | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "... | \n", "4471620 | \n", "4471620 | \n", "4477770 | \n", "4477770 | \n", "4477770 | \n", "4477770 | \n", "4482315 | \n", "4482315 | \n", "4482315 | \n", "4488054 | \n", "
| 1 | \n", "France | \n", "0 | \n", "0 | \n", "2 | \n", "3 | \n", "3 | \n", "3 | \n", "4 | \n", "5 | \n", "5 | \n", "... | \n", "33440664 | \n", "33461953 | \n", "33481790 | \n", "33493920 | \n", "33493920 | \n", "33493920 | \n", "33529669 | \n", "33553391 | \n", "33572631 | \n", "33591277 | \n", "
| 2 | \n", "Germany | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "1 | \n", "4 | \n", "4 | \n", "4 | \n", "... | \n", "31921578 | \n", "31921578 | \n", "32008122 | \n", "32041348 | \n", "32041349 | \n", "32041350 | \n", "32095854 | \n", "32095854 | \n", "32184553 | \n", "32218483 | \n", "
| 3 | \n", "Iran | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "... | \n", "7513928 | \n", "7516596 | \n", "7518974 | \n", "7520993 | \n", "7521969 | \n", "7523662 | \n", "7525628 | \n", "7527499 | \n", "7528961 | \n", "7530325 | \n", "
| 4 | \n", "Italy | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "... | \n", "21696242 | \n", "21721630 | \n", "21745065 | \n", "21767060 | \n", "21788862 | \n", "21806509 | \n", "21814856 | \n", "21845943 | \n", "21867757 | \n", "21888255 | \n", "
| 5 | \n", "Japan | \n", "2 | \n", "2 | \n", "2 | \n", "2 | \n", "4 | \n", "4 | \n", "7 | \n", "7 | \n", "11 | \n", "... | \n", "17537636 | \n", "17781018 | \n", "18001865 | \n", "18194170 | \n", "18374230 | \n", "18531986 | \n", "18627815 | \n", "18780302 | \n", "18949793 | \n", "19099600 | \n", "
| 6 | \n", "Korea, South | \n", "1 | \n", "1 | \n", "2 | \n", "2 | \n", "3 | \n", "4 | \n", "4 | \n", "4 | \n", "4 | \n", "... | \n", "22588640 | \n", "22701921 | \n", "22802985 | \n", "22898523 | \n", "22983818 | \n", "23026960 | \n", "23142479 | \n", "23246398 | \n", "23327897 | \n", "23417425 | \n", "
| 7 | \n", "Netherlands | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "... | \n", "8377269 | \n", "8378537 | \n", "8379737 | \n", "8380891 | \n", "8380891 | \n", "8380891 | \n", "8383706 | \n", "8384992 | \n", "8386189 | \n", "8386189 | \n", "
| 8 | \n", "Portugal | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "... | \n", "5399857 | \n", "5399857 | \n", "5406095 | \n", "5409185 | \n", "5409185 | \n", "5409185 | \n", "5413173 | \n", "5417101 | \n", "5420140 | \n", "5420140 | \n", "
| 9 | \n", "Spain | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "... | \n", "13323784 | \n", "13323784 | \n", "13323784 | \n", "13332976 | \n", "13332976 | \n", "13332976 | \n", "13332976 | \n", "13342530 | \n", "13342530 | \n", "13342530 | \n", "
| 10 | \n", "US | \n", "1 | \n", "1 | \n", "2 | \n", "2 | \n", "5 | \n", "5 | \n", "5 | \n", "6 | \n", "6 | \n", "... | \n", "93776222 | \n", "93927276 | \n", "94066043 | \n", "94186442 | \n", "94197793 | \n", "94204626 | \n", "94306725 | \n", "94378287 | \n", "94531854 | \n", "94649469 | \n", "
| 11 | \n", "United Kingdom | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "0 | \n", "... | \n", "23460787 | \n", "23460787 | \n", "23492875 | \n", "23492875 | \n", "23492875 | \n", "23492875 | \n", "23492875 | \n", "23492875 | \n", "23521792 | \n", "23521792 | \n", "
| 12 | \n", "Hong Kong | \n", "0 | \n", "2 | \n", "2 | \n", "5 | \n", "8 | \n", "8 | \n", "8 | \n", "10 | \n", "10 | \n", "... | \n", "1471509 | \n", "1479393 | \n", "1487972 | \n", "1495807 | \n", "1504264 | \n", "1513972 | \n", "1522460 | \n", "1531308 | \n", "1540803 | \n", "1551389 | \n", "
| 13 | \n", "China | \n", "548 | \n", "641 | \n", "918 | \n", "1401 | \n", "2067 | \n", "2869 | \n", "5501 | \n", "6077 | \n", "8131 | \n", "... | \n", "944631 | \n", "946165 | \n", "947626 | \n", "948009 | \n", "948316 | \n", "952082 | \n", "953856 | \n", "955555 | \n", "957285 | \n", "959314 | \n", "
14 rows × 955 columns
\n", "