From c08c54694687f7e88b0c5f4d5ab7afee323dedc6 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?No=C3=A9mie=20Kuenzi?= Date: Thu, 3 Jul 2025 18:19:32 +0200 Subject: [PATCH] adding hands-on and creating syndrome-grippal.csv --- module3/exo1/syndrome-grippal.csv | 274 ++++++++++++++++++++++++++++++ module3/hands-on.Rmd | 34 ++++ 2 files changed, 308 insertions(+) create mode 100644 module3/exo1/syndrome-grippal.csv create mode 100644 module3/hands-on.Rmd diff --git a/module3/exo1/syndrome-grippal.csv b/module3/exo1/syndrome-grippal.csv new file mode 100644 index 0000000..15132f9 --- /dev/null +++ b/module3/exo1/syndrome-grippal.csv @@ -0,0 +1,274 @@ +# {"columns":{"geo":"geo_insee","indicator":25,"time":"week","value":["inc","inc_low","inc_up","inc100","inc100_low","inc100_up"]},"query":{"geo_ref":"insee","indicator":25,"type":"all","period":[202016,202526],"geo":["PAY",1]},"compact":false,"time":"week","source":"réseau Sentinelles, INSERM, Sorbonne Université, https://www.sentiweb.fr","date":"2025-07-02T12:11:15+0200"} +"week","geo_insee","indicator","inc","inc100","inc_up","inc_low","inc100_up","inc100_low" +202016,"FR",25,41726,63,44257,39195,67,60 +202017,"FR",25,45903,70,51774,40032,79,61 +202018,"FR",25,34618,53,39737,29499,60,45 +202019,"FR",25,27347,42,31814,22880,48,35 +202020,"FR",25,28416,43,32957,23875,50,36 +202021,"FR",25,14651,22,17949,11353,27,17 +202022,"FR",25,30397,46,32550,28244,49,43 +202023,"FR",25,21692,33,23520,19864,36,30 +202024,"FR",25,20783,32,22565,19001,34,29 +202025,"FR",25,15352,23,16904,13800,26,21 +202026,"FR",25,10251,16,11522,8980,17,14 +202027,"FR",25,8978,14,10179,7777,15,12 +202028,"FR",25,10079,15,11375,8783,17,13 +202029,"FR",25,10061,15,11397,8725,17,13 +202030,"FR",25,13278,20,14843,11713,23,18 +202031,"FR",25,12018,18,13527,10509,21,16 +202032,"FR",25,14207,22,15941,12473,24,19 +202033,"FR",25,14219,22,16007,12431,24,19 +202034,"FR",25,14357,22,16049,12665,24,19 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du syndrôme grippal" +author: "NK" +date: "2025-07-03" +output: html_document +--- + +```{r setup, include=FALSE} +knitr::opts_chunk$set(echo = TRUE) +``` + +```{r} +library(parsedate) +``` + + +```{r} +data_url = "https://www.sentiweb.fr/datasets/all/inc-25-PAY-ds2.csv" +``` + +```{r} +data = read.csv(data_url, skip = 1) +head(data) +``` +```{r} +rows_na = apply(data, 1, function(x) any(is.na(x))) +data[rows_na,] +``` + +```{r} +class(data$week) +class(data$inc) +``` + -- 2.18.1