brew install auctex <spanstyle="font-weight: bold; font-style: italic;"># </span><spanstyle="font-weight: bold; font-style: italic;">The name may be slightly more complicated here</span>
brew install wget
brew install wget
brew tap dunn/emacs
brew install auctex
brew tap brewsci/science
brew install ess
</pre>
</div>
<p>
This provides an <code>emacs</code> command for use from the command line, plus a clickable application at <code>Cellar/emacs/26.1_1/Emacs.app</code> inside your Homebrew directory. If
you installed Homebrew at the default location <code>/usr/local</code>, then this is <code>/usr/local/Cellar/emacs/26.1_1/Emacs.app</code>.
If you installed Homebrew on an account with administrator privileges, you can add
This section is illustrated in a <ahref="https://www.fun-mooc.fr/courses/course-v1:inria+41016+session01bis/jump_to_id/9cfc7500f0ef46d288d2317ec7b037b4">video tutorial</a> (<i>"Mise en place
This section is illustrated in a <ahref="https://www.fun-mooc.fr/courses/course-v1:inria+41016+session01bis/jump_to_id/9cfc7500f0ef46d288d2317ec7b037b4">video tutorial</a> (<i>"Mise en place
Emacs/Orgmode"</i> in French). Watching it before following the
Emacs/Orgmode"</i> in French). Watching it before following the
...
@@ -197,9 +296,9 @@ adding a few org-mode specific configurations.
...
@@ -197,9 +296,9 @@ adding a few org-mode specific configurations.
<h2id="org62d8122">A stub of replicable article</h2>
<h2id="org86b127a">A stub of replicable article</h2>
<divclass="outline-text-2"id="text-org62d8122">
<divclass="outline-text-2"id="text-org86b127a">
<p>
<p>
This section is illustrated in a <ahref="https://www.fun-mooc.fr/courses/course-v1:inria+41016+session01bis/jump_to_id/9cfc7500f0ef46d288d2317ec7b037b4">video tutorial</a> (<i>"Écrire un article
This section is illustrated in a <ahref="https://www.fun-mooc.fr/courses/course-v1:inria+41016+session01bis/jump_to_id/9cfc7500f0ef46d288d2317ec7b037b4">video tutorial</a> (<i>"Écrire un article
réplicable avec Emacs/Orgmode"</i> in French). Watching it before
réplicable avec Emacs/Orgmode"</i> in French). Watching it before
...
@@ -365,22 +495,22 @@ chunk of code when exporting.
...
@@ -365,22 +495,22 @@ chunk of code when exporting.
<listyle="margin-bottom:0;"><ahref="https://app-learninglab.inria.fr/gitlab/learning-lab/mooc-rr-ressources/blob/master/module2/ressources/rr_org/journal.org">Common and step-by-step emacs shortcuts for our <i>reproducible research</i> configuration</a></li>
<listyle="margin-bottom:0;"><ahref="https://app-learninglab.inria.fr/gitlab/learning-lab/mooc-rr-ressources/blob/master/module2/ressources/rr_org/journal.org">Common and step-by-step emacs shortcuts for our <i>reproducible research</i> configuration</a></li>
<listyle="margin-bottom:0;"><ahref="https://www.gnu.org/software/emacs/refcards/pdf/refcard.pdf">The official GNU emacs refcard</a></li>
<listyle="margin-bottom:0;"><ahref="https://www.gnu.org/software/emacs/refcards/pdf/refcard.pdf">The official GNU emacs refcard</a></li>
...
@@ -389,9 +519,9 @@ cheat-sheats. Here is a selection in case it helps:
...
@@ -389,9 +519,9 @@ cheat-sheats. Here is a selection in case it helps:
<listyle="margin-bottom:0;"><ahref="https://app-learninglab.inria.fr/gitlab/learning-lab/mooc-rr-ressources/blob/master/module2/ressources/rr_org/journal.org">Common and step-by-step org-mode shortcuts for our <i>reproducible research</i> configuration</a></li>
<listyle="margin-bottom:0;"><ahref="https://app-learninglab.inria.fr/gitlab/learning-lab/mooc-rr-ressources/blob/master/module2/ressources/rr_org/journal.org">Common and step-by-step org-mode shortcuts for our <i>reproducible research</i> configuration</a></li>
<listyle="margin-bottom:0;"><ahref="https://orgmode.org/worg/orgcard.html">The official org-mode refcard</a></li>
<listyle="margin-bottom:0;"><ahref="https://orgmode.org/worg/orgcard.html">The official org-mode refcard</a></li>
...
@@ -400,22 +530,22 @@ cheat-sheats. Here is a selection in case it helps:
...
@@ -400,22 +530,22 @@ cheat-sheats. Here is a selection in case it helps:
<ahref="https://magit.vc/">Magit</a> is an emacs interface for Git. Its usage is briefly illustrated
<ahref="https://magit.vc/">Magit</a> is an emacs interface for Git. Its usage is briefly illustrated
in the context of this MOOC in a <ahref="https://www.fun-mooc.fr/courses/course-v1:inria+41016+session01bis/jump_to_id/9cfc7500f0ef46d288d2317ec7b037b4">video tutorial</a> (<i>"Utilisation
in the context of this MOOC in a <ahref="https://www.fun-mooc.fr/courses/course-v1:inria+41016+session01bis/jump_to_id/9cfc7500f0ef46d288d2317ec7b037b4">video tutorial</a> (<i>"Utilisation
...
@@ -444,9 +574,9 @@ invoke magit by using <code>C-x g</code>.
...
@@ -444,9 +574,9 @@ invoke magit by using <code>C-x g</code>.
<listyle="margin-bottom:0;"><ahref="https://github.com/dfeich/org-babel-examples">Many examples illustrating the use of different languages in org-mode</a></li>
<listyle="margin-bottom:0;"><ahref="https://github.com/dfeich/org-babel-examples">Many examples illustrating the use of different languages in org-mode</a></li>
The following <ahref="https://www.dataquest.io/blog/jupyter-notebook-tips-tricks-shortcuts/">webpage</a> lists several Jupyter tricks (in particular, it
The following <ahref="https://www.dataquest.io/blog/jupyter-notebook-tips-tricks-shortcuts/">webpage</a> lists several Jupyter tricks (in particular, it
illustrates many <code>Ipython magic</code> commands) that should improve your
illustrates many <code>Ipython magic</code> commands) that should improve your
First, download and install <ahref="https://www.anaconda.com/download/">Anaconda latest version</a>. We use Anaconda version <code>4.5.4</code> on our server .<br/>
Anaconda includes Python, the Jupyter Notebook, and other commonly used packages for scientific computing and data science.
The ipython notebook can then be run with the following command:
Then download the <ahref="https://gist.github.com/brospars/4671d9013f0d99e1c961482dab533c57">mooc<sub>rr</sub> environment file</a> and create it using conda: