diff --git a/module2/ressources/rstudio.html b/module2/ressources/rstudio.html index 618c52842e227cc57c12eb5895f63b6bf39d7a26..d85b23af8aa1bf75846407a6578b2b66094260f4 100644 --- a/module2/ressources/rstudio.html +++ b/module2/ressources/rstudio.html @@ -4,15 +4,15 @@

Table of Contents

@@ -20,15 +20,17 @@

If you have never used git with Rstudio, we strongly advise that you -follow the step-by-step explanations from Software Carpentry. It comes -with many screenshots and is quite progressive. Alternatively, you -may want to watch this video: +follow our tutorial on using git from Rstudio (in +French). Alternatively, you may want to watch this video (in +English). If you do not like videos, you should have a look at the +step-by-step explanations from Software Carpentry. It comes with many +screenshots and is quite progressive.

-

-The next sections provide information on how to install Rstudio. Before -proceeding, make sure you have read the "Git and GitLab" instructions. +The next sections provide information on how to install +Rstudio. Before proceeding, make sure you have followed the "Git and +GitLab" tutorial from the 4th sequence of the 2nd module.

@@ -56,13 +58,13 @@ of these documents:

  • Un court document sur R Markdown
    • -
    -

    Installing Rstudio

    -
    +
    +

    Installing Rstudio

    +
    -
    -

    Linux (debian, ubuntu)

    -
    +
    +

    Linux (debian, ubuntu)

    +

    We provide here only instructions for debian-based distributions. Feel free to contribute to this document to provide up-to-date information @@ -84,9 +86,9 @@ for upgrading…

    -
    -

    Installing R

    -
    +
    +

    Installing R

    +

    Beforehand, you need to install the R language and convenient packages by running (as root): @@ -119,9 +121,9 @@ to run (as root):

    -
    -

    Installing rstudio

    -
    +
    +

    Installing rstudio

    +

    Rstudio is unfortunately not packaged within debian so the easiest is to download the corresponding debian package on the Rstudio webpage @@ -139,9 +141,9 @@ sudo apt-get update ; sudo apt-get -f install -

    Mac OSX and Windows

    -
    +
    +

    Mac OSX and Windows

    +

    Some instructions on installing R and knitr must be missing. This diff --git a/module2/ressources/rstudio.org b/module2/ressources/rstudio.org index 7eac1320003ad7a2b47e530c4156d469ea654c46..1303797ae18853070f32f65b2e57fa121d198272 100644 --- a/module2/ressources/rstudio.org +++ b/module2/ressources/rstudio.org @@ -5,17 +5,16 @@ #+STARTUP: overview indent #+OPTIONS: num:nil toc:t - If you have never used git with Rstudio, *we strongly advise that you -follow the [[https://swcarpentry.github.io/git-novice/14-supplemental-rstudio/index.html][step-by-step explanations from Software Carpentry]]*. It comes -with many screenshots and is quite progressive. Alternatively, you -may want to watch this video: -#+BEGIN_EXPORT html - -#+END_EXPORT +follow [[https://youtu.be/mThPqRH9tmA][our tutorial on using git from Rstudio]]* (in +French). Alternatively, you may want to watch [[https://www.youtube.com/embed/uHYcDQDbMY8][this video]] (in +English). If you do not like videos, you should have a look at the +[[https://swcarpentry.github.io/git-novice/14-supplemental-rstudio/index.html][step-by-step explanations from Software Carpentry]]. It comes with many +screenshots and is quite progressive. -The next sections provide information on how to install Rstudio. Before -proceeding, make sure you have read the "Git and GitLab" instructions. +The next sections provide information on how to install +Rstudio. Before proceeding, make sure you have followed the [[https://youtu.be/LR6gRpmHWx0]["Git and +GitLab" tutorial]] from the 4th sequence of the 2nd module. Finally, you need to know that the Rstudio team has created a lot of very good material and tutorials. You should definitively look at the