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moocrr-reproducibility-study
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README.md
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......@@ -46,33 +46,34 @@ Non functional (expected values are $`5.085`$ and $`-0.1156`$)
- Confidence region: Identical (to [the one obtained with R](challenger.pdf)), Similar, Quite Different, Did not succeed
| Language | Language version | Main libraries | Tool | Operating System | $`\hat{\alpha}= 5.085`$ $`\hat{\beta} = -0.1156`$ | $`s_{\hat{\alpha}} = 3.052`$ $`s_{\hat{\beta}} = 0.047`$ | $`G^{2} = 18.086`$ $`dof = 21`$ | Figure | Confidence Region | Link to the document | Author |
| -------- | ---------------- | ------------------------------------------------------------- | ------- | ---------------------------- | ------------- | ---------- | ---------- | --------- | ---------- | ----------------------------------------------------------------- | ----------- |
| R | 3.4.4 | gglplot2-2.21 Epi 2.19 rmarkdown-1.10 | RStudio | Ubuntu 14.04 LTS | Identical | Identical | Identical |figure 4 OK| Identical |[Rmd](https://app-learninglab.inria.fr/gitlab/fd68a867f507580bd9ec9421cac0e770/mooc-rr/blob/master/module4/SpaceShuttle.Rmd) [pdf](https://app-learninglab.inria.fr/gitlab/fd68a867f507580bd9ec9421cac0e770/mooc-rr/blob/master/module4/SpaceShuttle.pdf) |JC Thalabard| | JC Thalabard |
| R | 3.5.1 | ggplot2 3.0.0 | RStudio | Debian GNU/Linux buster/sid | Identical | Identical | Identical | Identical | Identical | [Rmd](src/R/challenger.Rmd), [pdf](src/R/challenger_debian_alegrand.pdf) | A. Legrand |
| R | 3.5.1 | ggplot2 3.0.0 rmarkdown 1.8 | RStudio | Windows 7 32 bits | Identical | Identical | Identical | Identical | Identical | [pdf](src/R/challenger_R_Rmd_Windows_32bits_rmarkdown_1_8.pdf) | M.G. Dondon |
| R | 3.5.1 | ggplot2 3.0.0 rmarkdown 1.10 | RStudio | Windows 7 32 bits | Identical | Identical | Identical | Identical | Identical | [pdf](src/R/challenger_R_Rmd_Windows_32bits_rmarkdown_1_10.pdf) | M.G. Dondon |
| R | 3.5.1 | ggplot2 3.0.0 rmarkdown 1.10 | RStudio | Windows 7 x64 | Identical | Identical | Identical | Identical | Identical | [html](src/R/Challenger.html) | ???? |
| R | 3.5.1 | ggplot2 3.1.0 rmarkdown 1.10 | RStudio | GNU/Linux Manjaro 4.18.17-1 | Identical | Identical | Identical | Identical | Identical | [Rmd](https://app-learninglab.inria.fr/gitlab/0ff5ec0ebf4e500d1aa4b14c0d8efd67/mooc-rr/blob/e4db1956911a37407fe8a0718a34d9ff4b3ee33b/module4/re-analyse_shuttle_sguyader.Rmd), [PDF](https://app-learninglab.inria.fr/gitlab/0ff5ec0ebf4e500d1aa4b14c0d8efd67/mooc-rr/blob/e4db1956911a37407fe8a0718a34d9ff4b3ee33b/module4/re-analyse_shuttle_sguyader.pdf) | S. Guyader |
| R | 3.5.1 | ggplot2_3.0.0 | org-mode | GNU/Linux OpenSuse Leap 15.0 | don't know | don't know | don't know | don't know | don't kn | [org](https://app-learninglab.inria.fr/gitlab/moocrr-session1/moocrr-reproducibility-study/blob/master/src/R/challenger_R_org.org), [pdf](https://app-learninglab.inria.fr/gitlab/moocrr-session1/moocrr-reproducibility-study/blob/master/src/R/challenger_R_org.pdf) | JFM |
| R | 3.5.1 | ggplot2 3.0.0 rmarkdown 1.10 | RStudio | Windows 7 x64 | Identical | Identical | Identical | Identical | Identical | [html](src/R/study_vd.html) | V.Dordonnat |
| R | 3.5.1 | ggplot2_3.1.0 rmarkdown 1.10 | RStudio| Windows 8 x64 | Identical | Identical | Identical | Identical | Identical | [Rmd] (src/R/challenger_VL.Rmd)[html] (src/R/Challenger_VL.html) | V Laucou |
| R | 3.4.3 | ggplot2 2.2.1 | RStudio | macOS 10.14.1 | Identical | Identical | Identical | Identical | Identical | [Rmd](https://app-learninglab.inria.fr/gitlab/08e11bfd74562785ba326e1579ddc8bb/mooc-rr/blob/master/module4/Exo%201.Rmd) | J. Simo, |
| R | 3.2.3 | ggplot2 3.1.0 | RStudio | Linux Ubuntu 16.04 LTS | Identical | Identical | Identical | Identical | Identical | [pdf](https://app-learninglab.inria.fr/gitlab/ebe7629811d8feda9db361e15271ad4c/mooc-rr/blob/211ee2405e925c08ece1dc20febd0c63f566400a/module4/challenger_repro_lbouvier.pdf) | L. Bouvier |
| R | 3.5.1 |ggplot2_3.1.0 | RStudio | mac OS 10.11.6 | Identical | Identica | Identical | Identical | Identical | [pdf](https://app-learninglab.inria.fr/gitlab/8c37cd50d492bf77c8fb094346707768/mooc-rr/blob/master/module4/Essai_challenger.pdf), [Rmd](https://app-learninglab.inria.fr/gitlab/8c37cd50d492bf77c8fb094346707768/mooc-rr/blob/master/module4/Challenger.rmd) | J. Chantreau |
| R | 3.2.3 | ggplot2_2.0.0 | Rstudio | Trisquel GNU/Linux Flidas (8.0)| Identical | Identical | Identical | Identical | Identical | [pdf](https://app-learninglab.inria.fr/gitlab/moocrr-session1/moocrr-reproducibility-study/raw/584c4b5edec928b5c65c8e573e96d1873d6cc825/src/R/challenger.pdf) | A. Arias |
|R | 3.5.1 |ggplot2_3.1.0 | Rstudio | Windows 7 x64 | Identical | Identical | Identical | Identical | Identical | [pdf](https://app-learninglab.inria.fr/gitlab/9765c5626dd7645b37b48a8980ab1b86/mooc-rr/blob/master/module4/challenger.pdf) | L. Montuelle |
| R | 3.4.2 | ggplot2_3.1.0 | Rstudio | Windows 7 x64 (build 7601) Service Pack 1 | Identical | Identical | Identical | Identical | Identical | [html](https://app-learninglab.inria.fr/gitlab/9d69c8bacd26ffbec596435869a9e365/mooc-rr/blob/master/module4/challenger_ADoligez.html) | A. Doligez |
**Python** | | | | | | | | | | | |
| Python | 3.6.4 | statsmodels 0.9.0 numpy 1.13.3 pandas 0.22.0 matplotlib 2.2.2 | Jupyter | Linux Ubuntu 4.4.0-116-generic | Identical | Identical | Identical | Identical | Similar | [ipynb](src/Python3/challenger.ipynb), [pdf](src/Python3/challenger_ubuntuMOOC_alegrand.pdf) | A. Legrand |
| Python | 3.6.4 | statsmodels 0.9.0 numpy 1.13.3 pandas 0.22.0 matplotlib 2.2.3 | Jupyter | Linux Ubuntu 4.4.0-116-generic | Identical | Identical | Identical | Identical | Similar | [ipynb](https://app-learninglab.inria.fr/gitlab/209efe97d845ea4b57491275c640a3d4/mooc-rr/blob/master/module4/challenger.ipynb), [pdf](https://app-learninglab.inria.fr/gitlab/209efe97d845ea4b57491275c640a3d4/mooc-rr/blob/master/module4/challenger-jupiter.pdf) | N. Maurin |
| Python | 3.7.0 | statsmodels 0.9.0 numpy 1.15.4 pandas 0.23.4 matplotlib 2.2.3 | Jupyter | Windows 7 64 bits | Identical | Identical | Identical | Identical | Similar | [ipynb](src/Python3/challenger_Python_ipynb.ipynb), [pdf](src/Python3/challenger_Python_ipynb_Windows_64bits.pdf) | M.G. Dondon |
| Python | 3.7.0 | statsmodels 0.9.0 numpy 1.15.4 pandas 0.23.4 matplotlib 2.2.3 | Emacs | Windows 7 64 bits | Identical | Identical | Identical | Identical | Similar | [org](src/Python3/challenger_Python_org.org), [pdf](src/Python3/challenger_Python_org_Windows_64bits.pdf) | M.G. Dondon |
| Python | 3.7.0 | statsmodels 0.9.0 numpy 1.15.4 pandas 0.23.4 matplotlib 3.0.2 | Emacs | Windows 7 64 bits | Identical | Identical | Identical | Identical | Similar | [org](src/Python3/challenger_Python_org.org), [pdf](src/Python3/challenger_Python_org_Windows_64bits_v2.pdf) | M.G. Dondon |
| Python | 3.6.5 | statsmodels 0.9.0 numpy 1.15.4 pandas 0.23.4 matplotlib 3.0.2 | Vim | Darwin Kernel Version 16.7.0 | Identical | Identical | Identical | Identical | Similar |[pdf](https://app-learninglab.inria.fr/gitlab/c914387a7e6f10f1216e1bc16a239ade/mooc-rr/blob/master/module4/exo1.pdf), [Rmd](https://app-learninglab.inria.fr/gitlab/c914387a7e6f10f1216e1bc16a239ade/mooc-rr/blob/master/module4/exo1.Rmd), [py](https://app-learninglab.inria.fr/gitlab/c914387a7e6f10f1216e1bc16a239ade/mooc-rr/blob/master/module4/test.py) | Anne C. |
| Python | 3.6.7 | statsmodels 0.8.0 numpy 1.15.4 pandas 0.23.3 matplotlib 2.2.2 | Emacs | Debian GNU/Linux buster/sid | Identical | Different | Different | Different | Similar | [org](https://app-learninglab.inria.fr/gitlab/e108dddfe1a07ebd6ae763f9c4cdd901/mooc-rr/blob/master/module4/challenger.org), [tar.gz](https://app-learninglab.inria.fr/gitlab/e108dddfe1a07ebd6ae763f9c4cdd901/mooc-rr/blob/master/module4/archive.tar.gz) | R. Letot |
| Python | 3.7.1 | statsmodels 0.9.0 numpy 1.15.4 pandas 0.23.3 matplotlib 2.2.3 | Emacs | Debian GNU/Linux buster/sid | Identical | Identical | Identical | Different | Similar | [org](https://app-learninglab.inria.fr/gitlab/e108dddfe1a07ebd6ae763f9c4cdd901/mooc-rr/blob/master/module4/challenger2.org), [tar.gz](https://app-learninglab.inria.fr/gitlab/e108dddfe1a07ebd6ae763f9c4cdd901/mooc-rr/blob/master/module4/archive2.tar.gz) | R. Letot |
| Python | 3.6.4 | statsmodels 0.8.0 numpy 1.14.2 pandas 0.22.0 matplotlib 3.0.1 | Jupyter | Windows 10 | Identical | Different | Different | Identical | Similar | [ipynb](https://app-learninglab.inria.fr/gitlab/44e0ff8c8d8f82a505f2746a06b4039c/mooc-rr/tree/master/module4/Exercise_module4.ipynb) | L. Pacini |
| Python | 3.6.4 | statsmodels 0.8.0 numpy 1.14.2 pandas 0.22.0 matplotlib 3.0.1 | Jupyter | Windows 10 | Identical | Identical | Identical | Did not succed | Did not succed | [ipynb](https://app-learninglab.inria.fr/gitlab/44e0ff8c8d8f82a505f2746a06b4039c/mooc-rr/blob/master/module4/Exercise_module4_py2.ipynb) | L. Pacini |
| **SAS** | | | | | | | | | | | |
| SAS | 9.4 | | Jupyter | Windows 7 | Identical | Identical | Identical | Identical | Identical | [ipynb](src/SAS/challenger_SAS_ipynb.ipynb), [pdf](src/SAS/challenger_SAS_ipynb.pdf) | M.G. Dondon |
| -------- | ---------------- | ------------------------------------------------------------- | ------- | ---------------------------- | ------------- | ---------- | ---------- | --------- | ---------- | ----------------------------------------------------------------- | ----------- |
| R | 3.4.4 | gglplot2-2.21 Epi 2.19 rmarkdown-1.10 | RStudio | Ubuntu 14.04 LTS | Identical | Identical | Identical |figure 4 OK| Identical | [Rmd](https://app-learninglab.inria.fr/gitlab/fd68a867f507580bd9ec9421cac0e770/mooc-rr/blob/master/module4/SpaceShuttle.Rmd) [pdf](https://app-learninglab.inria.fr/gitlab/fd68a867f507580bd9ec9421cac0e770/mooc-rr/blob/master/module4/SpaceShuttle.pdf) | JC Thalabard| | JC Thalabard |
| R | 3.5.1 | ggplot2 3.0.0 | RStudio | Debian GNU/Linux buster/sid | Identical | Identical | Identical | Identical | Identical | [Rmd](src/R/challenger.Rmd), [pdf](src/R/challenger_debian_alegrand.pdf) | A. Legrand |
| R | 3.5.1 | ggplot2 3.0.0 rmarkdown 1.8 | RStudio | Windows 7 32 bits | Identical | Identical | Identical | Identical | Identical | [pdf](src/R/challenger_R_Rmd_Windows_32bits_rmarkdown_1_8.pdf) | M.G. Dondon |
| R | 3.5.1 | ggplot2 3.0.0 rmarkdown 1.10 | RStudio | Windows 7 32 bits | Identical | Identical | Identical | Identical | Identical | [pdf](src/R/challenger_R_Rmd_Windows_32bits_rmarkdown_1_10.pdf) | M.G. Dondon |
| R | 3.5.1 | ggplot2 3.0.0 rmarkdown 1.10 | RStudio | Windows 7 x64 | Identical | Identical | Identical | Identical | Identical | [html](src/R/Challenger.html) | ???? |
| R | 3.5.1 | ggplot2 3.1.0 rmarkdown 1.10 | RStudio | GNU/Linux Manjaro 4.18.17-1 | Identical | Identical | Identical | Identical | Identical | [Rmd](https://app-learninglab.inria.fr/gitlab/0ff5ec0ebf4e500d1aa4b14c0d8efd67/mooc-rr/blob/e4db1956911a37407fe8a0718a34d9ff4b3ee33b/module4/re-analyse_shuttle_sguyader.Rmd), [PDF](https://app-learninglab.inria.fr/gitlab/0ff5ec0ebf4e500d1aa4b14c0d8efd67/mooc-rr/blob/e4db1956911a37407fe8a0718a34d9ff4b3ee33b/module4/re-analyse_shuttle_sguyader.pdf) | S. Guyader |
| R | 3.5.1 | ggplot2 3.0.0 | org-mode | GNU/Linux OpenSuse Leap 15.0 | don't know | don't know | don't know | don't know | don't kn | [org](https://app-learninglab.inria.fr/gitlab/moocrr-session1/moocrr-reproducibility-study/blob/master/src/R/challenger_R_org.org), [pdf](https://app-learninglab.inria.fr/gitlab/moocrr-session1/moocrr-reproducibility-study/blob/master/src/R/challenger_R_org.pdf) | JFM |
| R | 3.5.1 | ggplot2 3.0.0 | org-mode | Windows 7 64 bits | Identical | Identical | Identical | Identical | Identical | [org](https://app-learninglab.inria.fr/gitlab/moocrr-session1/moocrr-reproducibility-study/blob/master/src/R/challenger_R_org_Windows_64bits.org), [pdf](https://app-learninglab.inria.fr/gitlab/moocrr-session1/moocrr-reproducibility-study/blob/master/src/R/challenger_R_org_Windows_64bits.pdf) | M.G. Dondon |
| R | 3.5.1 | ggplot2 3.0.0 rmarkdown 1.10 | RStudio | Windows 7 x64 | Identical | Identical | Identical | Identical | Identical | [html](src/R/study_vd.html) | V.Dordonnat |
| R | 3.5.1 | ggplot2 3.1.0 rmarkdown 1.10 | RStudio | Windows 8 x64 | Identical | Identical | Identical | Identical | Identical | [Rmd](src/R/challenger_VL.Rmd), [html](src/R/Challenger_VL.html) | V Laucou |
| R | 3.4.3 | ggplot2 2.2.1 | RStudio | macOS 10.14.1 | Identical | Identical | Identical | Identical | Identical | [Rmd](https://app-learninglab.inria.fr/gitlab/08e11bfd74562785ba326e1579ddc8bb/mooc-rr/blob/master/module4/Exo%201.Rmd) | J. Simo, |
| R | 3.2.3 | ggplot2 3.1.0 | RStudio | Linux Ubuntu 16.04 LTS | Identical | Identical | Identical | Identical | Identical | [pdf](https://app-learninglab.inria.fr/gitlab/ebe7629811d8feda9db361e15271ad4c/mooc-rr/blob/211ee2405e925c08ece1dc20febd0c63f566400a/module4/challenger_repro_lbouvier.pdf) | L. Bouvier |
| R | 3.5.1 | ggplot2 3.1.0 | RStudio | mac OS 10.11.6 | Identical | Identica | Identical | Identical | Identical | [pdf](https://app-learninglab.inria.fr/gitlab/8c37cd50d492bf77c8fb094346707768/mooc-rr/blob/master/module4/Essai_challenger.pdf), [Rmd](https://app-learninglab.inria.fr/gitlab/8c37cd50d492bf77c8fb094346707768/mooc-rr/blob/master/module4/Challenger.rmd) | J. Chantreau|
| R | 3.2.3 | ggplot2_2.0.0 | Rstudio | Trisquel GNU/Linux Flidas (8.0)| Identical | Identical | Identical | Identical | Identical | [pdf](https://app-learninglab.inria.fr/gitlab/moocrr-session1/moocrr-reproducibility-study/raw/584c4b5edec928b5c65c8e573e96d1873d6cc825/src/R/challenger.pdf) | A. Arias |
|R | 3.5.1 | ggplot2_3.1.0 | Rstudio | Windows 7 x64 | Identical | Identical | Identical | Identical | Identical | [pdf](https://app-learninglab.inria.fr/gitlab/9765c5626dd7645b37b48a8980ab1b86/mooc-rr/blob/master/module4/challenger.pdf) | L. Montuelle|
| R | 3.4.2 | ggplot 3.1.0 | Rstudio | Windows 7 x64 (build 7601) Service Pack 1 | Identical | Identical | Identical | Identical | Identical | [html](https://app-learninglab.inria.fr/gitlab/9d69c8bacd26ffbec596435869a9e365/mooc-rr/blob/master/module4/challenger_ADoligez.html) | A. Doligez |
**Python** | | | | | | | | | | | |
| Python | 3.6.4 | statsmodels 0.9.0 numpy 1.13.3 pandas 0.22.0 matplotlib 2.2.2 | Jupyter | Linux Ubuntu 4.4.0-116-generic | Identical | Identical | Identical | Identical | Similar | [ipynb](src/Python3/challenger.ipynb), [pdf](src/Python3/challenger_ubuntuMOOC_alegrand.pdf) | A. Legrand |
| Python | 3.6.4 | statsmodels 0.9.0 numpy 1.13.3 pandas 0.22.0 matplotlib 2.2.3 | Jupyter | Linux Ubuntu 4.4.0-116-generic | Identical | Identical | Identical | Identical | Similar | [ipynb](https://app-learninglab.inria.fr/gitlab/209efe97d845ea4b57491275c640a3d4/mooc-rr/blob/master/module4/challenger.ipynb), [pdf](https://app-learninglab.inria.fr/gitlab/209efe97d845ea4b57491275c640a3d4/mooc-rr/blob/master/module4/challenger-jupiter.pdf) | N. Maurin |
| Python | 3.7.0 | statsmodels 0.9.0 numpy 1.15.4 pandas 0.23.4 matplotlib 2.2.3 | Jupyter | Windows 7 64 bits | Identical | Identical | Identical | Identical | Similar | [ipynb](src/Python3/challenger_Python_ipynb.ipynb), [pdf](src/Python3/challenger_Python_ipynb_Windows_64bits.pdf) | M.G. Dondon |
| Python | 3.7.0 | statsmodels 0.9.0 numpy 1.15.4 pandas 0.23.4 matplotlib 2.2.3 | Emacs | Windows 7 64 bits | Identical | Identical | Identical | Identical | Similar | [org](src/Python3/challenger_Python_org.org), [pdf](src/Python3/challenger_Python_org_Windows_64bits.pdf) | M.G. Dondon |
| Python | 3.7.0 | statsmodels 0.9.0 numpy 1.15.4 pandas 0.23.4 matplotlib 3.0.2 | Emacs | Windows 7 64 bits | Identical | Identical | Identical | Identical | Similar | [org](src/Python3/challenger_Python_org.org), [pdf](src/Python3/challenger_Python_org_Windows_64bits_v2.pdf) | M.G. Dondon |
| Python | 3.6.5 | statsmodels 0.9.0 numpy 1.15.4 pandas 0.23.4 matplotlib 3.0.2 | Vim | Darwin Kernel Version 16.7.0 | Identical | Identical | Identical | Identical | Similar | [pdf](https://app-learninglab.inria.fr/gitlab/c914387a7e6f10f1216e1bc16a239ade/mooc-rr/blob/master/module4/exo1.pdf), [Rmd](https://app-learninglab.inria.fr/gitlab/c914387a7e6f10f1216e1bc16a239ade/mooc-rr/blob/master/module4/exo1.Rmd), [py](https://app-learninglab.inria.fr/gitlab/c914387a7e6f10f1216e1bc16a239ade/mooc-rr/blob/master/module4/test.py) | Anne C. |
| Python | 3.6.7 | statsmodels 0.8.0 numpy 1.15.4 pandas 0.23.3 matplotlib 2.2.2 | Emacs | Debian GNU/Linux buster/sid | Identical | Different | Different | Different | Similar | [org](https://app-learninglab.inria.fr/gitlab/e108dddfe1a07ebd6ae763f9c4cdd901/mooc-rr/blob/master/module4/challenger.org), [tar.gz](https://app-learninglab.inria.fr/gitlab/e108dddfe1a07ebd6ae763f9c4cdd901/mooc-rr/blob/master/module4/archive.tar.gz) | R. Letot |
| Python | 3.7.1 | statsmodels 0.9.0 numpy 1.15.4 pandas 0.23.3 matplotlib 2.2.3 | Emacs | Debian GNU/Linux buster/sid | Identical | Identical | Identical | Different | Similar | [org](https://app-learninglab.inria.fr/gitlab/e108dddfe1a07ebd6ae763f9c4cdd901/mooc-rr/blob/master/module4/challenger2.org), [tar.gz](https://app-learninglab.inria.fr/gitlab/e108dddfe1a07ebd6ae763f9c4cdd901/mooc-rr/blob/master/module4/archive2.tar.gz) | R. Letot |
| Python | 3.6.4 | statsmodels 0.8.0 numpy 1.14.2 pandas 0.22.0 matplotlib 3.0.1 | Jupyter | Windows 10 | Identical | Different | Different | Identical | Similar | [ipynb](https://app-learninglab.inria.fr/gitlab/44e0ff8c8d8f82a505f2746a06b4039c/mooc-rr/tree/master/module4/Exercise_module4.ipynb) | L. Pacini |
| Python | 3.6.4 | statsmodels 0.8.0 numpy 1.14.2 pandas 0.22.0 matplotlib 3.0.1 | Jupyter | Windows 10 | Identical | Identical | Identical | Did not succed | Did not succed | [ipynb](https://app-learninglab.inria.fr/gitlab/44e0ff8c8d8f82a505f2746a06b4039c/mooc-rr/blob/master/module4/Exercise_module4_py2.ipynb) | L. Pacini |
| **SAS** | | | | | | | | | | | |
| SAS | 9.4 | | Jupyter | Windows 7 | Identical | Identical | Identical | Identical | Identical | [ipynb](src/SAS/challenger_SAS_ipynb.ipynb), [pdf](src/SAS/challenger_SAS_ipynb.pdf) | M.G. Dondon |
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