@@ -47,3 +47,13 @@ It sunny and I just realised that I can ear the church bell from my garden. Ah y
I choose to follow the Rstudio tutorial even if I already know how to produce Rmarkdown files, but it would be cool to try later OrgMode, so that I could use Emacs to do eveything (while fore now I am only using it to produce Latex documents).
Something I didn't know: when you use another langage than R (for example when I use some pieces of bash/python for OBITOOLS pipelines), the variables generated in a chunck are not kept in memory and cannot be used from one chunk to another (which is the case for R code).
### 26.03.20
Wow, I really want to try org-mode now...
Learnt some really cool stuff about having a journal, and lab books. So far, my lab book have only been a paper book, and about my experiments, not my analysis.
I attempted at some point to have a data analysis "lab book" but a paper version is obviously not the best choice for code. I gave up after looking for a informatic tool without succes.
I should later read [this article](http://starpu-simgrid.gforge.inria.fr/misc/SIGOPS_paper.pdf) untitled **An Effective Git And Org-Mode Based WorkflowFor Reproducible Research**
