Création du document d'analyse sur la varicelle, importation des données,...

Création du document d'analyse sur la varicelle, importation des données, suppression des lignes vides
parent 4950fc4d
...@@ -10,7 +10,9 @@ ...@@ -10,7 +10,9 @@
{ {
"cell_type": "code", "cell_type": "code",
"execution_count": 1, "execution_count": 1,
"metadata": {}, "metadata": {
"scrolled": true
},
"outputs": [], "outputs": [],
"source": [ "source": [
"%matplotlib inline\n", "%matplotlib inline\n",
...@@ -22,7 +24,9 @@ ...@@ -22,7 +24,9 @@
{ {
"cell_type": "code", "cell_type": "code",
"execution_count": 2, "execution_count": 2,
"metadata": {}, "metadata": {
"scrolled": true
},
"outputs": [], "outputs": [],
"source": [ "source": [
"data_url = \"http://www.sentiweb.fr/datasets/incidence-PAY-3.csv\"" "data_url = \"http://www.sentiweb.fr/datasets/incidence-PAY-3.csv\""
...@@ -38,7 +42,9 @@ ...@@ -38,7 +42,9 @@
{ {
"cell_type": "code", "cell_type": "code",
"execution_count": 4, "execution_count": 4,
"metadata": {}, "metadata": {
"scrolled": true
},
"outputs": [], "outputs": [],
"source": [ "source": [
"file_name = \"syndrome-grippal.csv\"\n", "file_name = \"syndrome-grippal.csv\"\n",
...@@ -1058,7 +1064,9 @@ ...@@ -1058,7 +1064,9 @@
{ {
"cell_type": "code", "cell_type": "code",
"execution_count": null, "execution_count": null,
"metadata": {}, "metadata": {
"scrolled": true
},
"outputs": [], "outputs": [],
"source": [ "source": [
"raw_data[raw_data.isnull().any(axis=1)]" "raw_data[raw_data.isnull().any(axis=1)]"
...@@ -1074,7 +1082,9 @@ ...@@ -1074,7 +1082,9 @@
{ {
"cell_type": "code", "cell_type": "code",
"execution_count": null, "execution_count": null,
"metadata": {}, "metadata": {
"scrolled": true
},
"outputs": [], "outputs": [],
"source": [ "source": [
"data = raw_data.dropna().copy()\n", "data = raw_data.dropna().copy()\n",
...@@ -1102,7 +1112,9 @@ ...@@ -1102,7 +1112,9 @@
{ {
"cell_type": "code", "cell_type": "code",
"execution_count": null, "execution_count": null,
"metadata": {}, "metadata": {
"scrolled": true
},
"outputs": [], "outputs": [],
"source": [ "source": [
"def convert_week(year_and_week_int):\n", "def convert_week(year_and_week_int):\n",
...@@ -1159,7 +1171,9 @@ ...@@ -1159,7 +1171,9 @@
{ {
"cell_type": "code", "cell_type": "code",
"execution_count": null, "execution_count": null,
"metadata": {}, "metadata": {
"scrolled": true
},
"outputs": [], "outputs": [],
"source": [ "source": [
"periods = sorted_data.index\n", "periods = sorted_data.index\n",
...@@ -1179,7 +1193,9 @@ ...@@ -1179,7 +1193,9 @@
{ {
"cell_type": "code", "cell_type": "code",
"execution_count": null, "execution_count": null,
"metadata": {}, "metadata": {
"scrolled": true
},
"outputs": [], "outputs": [],
"source": [ "source": [
"sorted_data['inc'].plot()" "sorted_data['inc'].plot()"
...@@ -1195,7 +1211,9 @@ ...@@ -1195,7 +1211,9 @@
{ {
"cell_type": "code", "cell_type": "code",
"execution_count": null, "execution_count": null,
"metadata": {}, "metadata": {
"scrolled": true
},
"outputs": [], "outputs": [],
"source": [ "source": [
"sorted_data['inc'][-200:].plot()" "sorted_data['inc'][-200:].plot()"
...@@ -1254,7 +1272,9 @@ ...@@ -1254,7 +1272,9 @@
{ {
"cell_type": "code", "cell_type": "code",
"execution_count": null, "execution_count": null,
"metadata": {}, "metadata": {
"scrolled": true
},
"outputs": [], "outputs": [],
"source": [ "source": [
"year = []\n", "year = []\n",
...@@ -1278,7 +1298,9 @@ ...@@ -1278,7 +1298,9 @@
{ {
"cell_type": "code", "cell_type": "code",
"execution_count": null, "execution_count": null,
"metadata": {}, "metadata": {
"scrolled": true
},
"outputs": [], "outputs": [],
"source": [ "source": [
"yearly_incidence.plot(style='*')" "yearly_incidence.plot(style='*')"
...@@ -1294,7 +1316,9 @@ ...@@ -1294,7 +1316,9 @@
{ {
"cell_type": "code", "cell_type": "code",
"execution_count": null, "execution_count": null,
"metadata": {}, "metadata": {
"scrolled": true
},
"outputs": [], "outputs": [],
"source": [ "source": [
"yearly_incidence.sort_values()" "yearly_incidence.sort_values()"
...@@ -1311,7 +1335,9 @@ ...@@ -1311,7 +1335,9 @@
{ {
"cell_type": "code", "cell_type": "code",
"execution_count": null, "execution_count": null,
"metadata": {}, "metadata": {
"scrolled": true
},
"outputs": [], "outputs": [],
"source": [ "source": [
"yearly_incidence.hist(xrot=20)" "yearly_incidence.hist(xrot=20)"
......
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