@@ -144,39 +144,6 @@ In step 1, you were told to create an journal in
backed up in a revision control system like git. We leave it up to set
this up but if you have any trouble, feel free to ask on the FUN
forums.
* Emacs Tips and tricks
** Cheat-sheets
Learning emacs and org-mode can be difficult as there is an inordinate
amount of shortcuts. Many people have thus come up with
cheat-sheats. Here is a selection in case it helps:
*** Emacs
- [[file:org/journal.org::*Emacs%20shortcuts][Common and step-by-step emacs shortcuts for our /reproducible research/ configuration]]
- [[https://www.gnu.org/software/emacs/refcards/pdf/refcard.pdf][The official GNU emacs refcard]]
- Two graphical cheat-sheats by Sacha Hua on [[http://sachachua.com/blog/wp-content/uploads/2013/05/How-to-Learn-Emacs-v2-Large.png][how to learn emacs]] and on
[[http://sachachua.com/blog/wp-content/uploads/2013/08/20130830-Emacs-Newbie-How-to-Learn-Emacs-Keyboard-Shortcuts.png][how to learn emacs shortcuts]].
*** Org-mode
- [[file:org/journal.org::*Org-mode][Common and step-by-step org-mode shortcuts for our /reproducible research/ configuration]]
- [[https://orgmode.org/worg/orgcard.html][The official org-mode refcard]]
- [[https://orgmode.org/worg/dev/org-syntax.html][The official description of the org-mode syntax]] and a [[https://gist.github.com/hoeltgman/3825415][relatively concise description of the org-mode syntax]].
** Video tutorials
For those of you who prefer video explanations, here is a [[https://www.youtube.com/playlist?list=PL9KxKa8NpFxIcNQa9js7dQQIHc81b0-Xg][Youtube
channel with many step by step emacs tutorials]].
** Additional useful emacs packages
*** Company-mode
[[http://company-mode.github.io/][Company-mode]] is a text completion framework for Emacs. It allows to
have smart completion in emacs for the most common languages. If you
feel this is needed, you should follow the instructions from the
official webpage: http://company-mode.github.io/
*** Magit
[[https://magit.vc/][Magit]] is an emacs interface for Git. It is very powerfull and we use
it on a daily basis but you should definitely understand what git does
behind the scene beforehand. If you feel this would be useful for you,
- [[https://github.com/dfeich/org-babel-examples][Many examples illustrating the use of different languages in org-mode]]
* A replicable article
** A stub of replicable article
Remember, you need a working LaTeX and R environment. If you can't
open a terminal and run the commands =R= and =pdflatex=, you will not be
...
...
@@ -223,3 +190,36 @@ code when exporting, just look for the following line in [[file:replicable_artic
If you remove the =# = in the beginning of the line, it will not be a
comment anymore and will indicate org-mode to stop evaluating every
chunk of code when exporting.
* Emacs Tips and tricks
** Cheat-sheets
Learning emacs and org-mode can be difficult as there is an inordinate
amount of shortcuts. Many people have thus come up with
cheat-sheats. Here is a selection in case it helps:
*** Emacs
- [[file:org/journal.org::*Emacs%20shortcuts][Common and step-by-step emacs shortcuts for our /reproducible research/ configuration]]
- [[https://www.gnu.org/software/emacs/refcards/pdf/refcard.pdf][The official GNU emacs refcard]]
- Two graphical cheat-sheats by Sacha Hua on [[http://sachachua.com/blog/wp-content/uploads/2013/05/How-to-Learn-Emacs-v2-Large.png][how to learn emacs]] and on
[[http://sachachua.com/blog/wp-content/uploads/2013/08/20130830-Emacs-Newbie-How-to-Learn-Emacs-Keyboard-Shortcuts.png][how to learn emacs shortcuts]].
*** Org-mode
- [[file:org/journal.org::*Org-mode][Common and step-by-step org-mode shortcuts for our /reproducible research/ configuration]]
- [[https://orgmode.org/worg/orgcard.html][The official org-mode refcard]]
- [[https://orgmode.org/worg/dev/org-syntax.html][The official description of the org-mode syntax]] and a [[https://gist.github.com/hoeltgman/3825415][relatively concise description of the org-mode syntax]].
** Video tutorials
For those of you who prefer video explanations, here is a [[https://www.youtube.com/playlist?list=PL9KxKa8NpFxIcNQa9js7dQQIHc81b0-Xg][Youtube
channel with many step by step emacs tutorials]].
** Additional useful emacs packages
*** Company-mode
[[http://company-mode.github.io/][Company-mode]] is a text completion framework for Emacs. It allows to
have smart completion in emacs for the most common languages. If you
feel this is needed, you should follow the instructions from the
official webpage: http://company-mode.github.io/
*** Magit
[[https://magit.vc/][Magit]] is an emacs interface for Git. It is very powerfull and we use
it on a daily basis but you should definitely understand what git does
behind the scene beforehand. If you feel this would be useful for you,
