Commit 9db582b7 authored by Arnaud Legrand's avatar Arnaud Legrand

Update take into account the recent video tutorials.

parent cea02efd
......@@ -4,15 +4,15 @@
<h2>Table of Contents</h2>
<div id="text-table-of-contents">
<ul style="margin:0 0;">
<li style="margin-bottom:0;"><a href="#org996bb6e">Installing Rstudio</a>
<li style="margin-bottom:0;"><a href="#org755f8e9">Installing Rstudio</a>
<ul style="margin:0 0;">
<li style="margin-bottom:0;"><a href="#org47dc640">Linux (debian, ubuntu)</a>
<li style="margin-bottom:0;"><a href="#org83522e8">Linux (debian, ubuntu)</a>
<ul style="margin:0 0;">
<li style="margin-bottom:0;"><a href="#org5b5cfe0">Installing R</a></li>
<li style="margin-bottom:0;"><a href="#orgfebba3b">Installing rstudio</a></li>
<li style="margin-bottom:0;"><a href="#org660cd1f">Installing R</a></li>
<li style="margin-bottom:0;"><a href="#orgfcfe08d">Installing rstudio</a></li>
</ul>
</li>
<li style="margin-bottom:0;"><a href="#org697af62">Mac OSX and Windows</a></li>
<li style="margin-bottom:0;"><a href="#org2040994">Mac OSX and Windows</a></li>
</ul>
</li>
</ul>
......@@ -20,15 +20,17 @@
</div>
<p>
If you have never used git with Rstudio, <b>we strongly advise that you
follow the <a href="https://swcarpentry.github.io/git-novice/14-supplemental-rstudio/index.html">step-by-step explanations from Software Carpentry</a></b>. It comes
with many screenshots and is quite progressive. Alternatively, you
may want to watch this video:
follow <a href="https://youtu.be/mThPqRH9tmA">our tutorial on using git from Rstudio</a></b> (in
French). Alternatively, you may want to watch <a href="https://www.youtube.com/embed/uHYcDQDbMY8">this video</a> (in
English). If you do not like videos, you should have a look at the
<a href="https://swcarpentry.github.io/git-novice/14-supplemental-rstudio/index.html">step-by-step explanations from Software Carpentry</a>. It comes with many
screenshots and is quite progressive.
</p>
<iframe width="854" height="480" src="https://www.youtube.com/embed/uHYcDQDbMY8" frameborder="0" allow="autoplay; encrypted-media" allowfullscreen></iframe>
<p>
The next sections provide information on how to install Rstudio. Before
proceeding, make sure you have read the "Git and GitLab" instructions.
The next sections provide information on how to install
Rstudio. Before proceeding, make sure you have followed the <a href="https://youtu.be/LR6gRpmHWx0">"Git and
GitLab" tutorial</a> from the 4th sequence of the 2nd module.
</p>
<p>
......@@ -56,13 +58,13 @@ of these documents:
<li style="margin-bottom:0;"><a href="https://www.fun-mooc.fr/c4x/UPSUD/42001S02/asset/RMarkdown.pdf">Un court document sur R Markdown</a></li>
</ul>
<div id="outline-container-org996bb6e" class="outline-2">
<h2 id="org996bb6e">Installing Rstudio</h2>
<div class="outline-text-2" id="text-org996bb6e">
<div id="outline-container-org755f8e9" class="outline-2">
<h2 id="org755f8e9">Installing Rstudio</h2>
<div class="outline-text-2" id="text-org755f8e9">
</div>
<div id="outline-container-org47dc640" class="outline-3">
<h3 id="org47dc640">Linux (debian, ubuntu)</h3>
<div class="outline-text-3" id="text-org47dc640">
<div id="outline-container-org83522e8" class="outline-3">
<h3 id="org83522e8">Linux (debian, ubuntu)</h3>
<div class="outline-text-3" id="text-org83522e8">
<p>
We provide here only instructions for debian-based distributions. Feel
free to contribute to this document to provide up-to-date information
......@@ -84,9 +86,9 @@ for upgrading&#x2026;
</p>
</div>
<div id="outline-container-org5b5cfe0" class="outline-4">
<h4 id="org5b5cfe0">Installing R</h4>
<div class="outline-text-4" id="text-org5b5cfe0">
<div id="outline-container-org660cd1f" class="outline-4">
<h4 id="org660cd1f">Installing R</h4>
<div class="outline-text-4" id="text-org660cd1f">
<p>
Beforehand, you need to install the R language and convenient packages
by running (as root):
......@@ -119,9 +121,9 @@ to run (as root):
</div>
</div>
<div id="outline-container-orgfebba3b" class="outline-4">
<h4 id="orgfebba3b">Installing rstudio</h4>
<div class="outline-text-4" id="text-orgfebba3b">
<div id="outline-container-orgfcfe08d" class="outline-4">
<h4 id="orgfcfe08d">Installing rstudio</h4>
<div class="outline-text-4" id="text-orgfcfe08d">
<p>
Rstudio is unfortunately not packaged within debian so the easiest is
to download the corresponding debian package on the <a href="https://www.rstudio.com/products/rstudio/download/#download">Rstudio webpage</a>
......@@ -139,9 +141,9 @@ sudo apt-get update ; sudo apt-get -f install <span style="font-weight: bold; fo
</div>
</div>
</div>
<div id="outline-container-org697af62" class="outline-3">
<h3 id="org697af62">Mac OSX and Windows</h3>
<div class="outline-text-3" id="text-org697af62">
<div id="outline-container-org2040994" class="outline-3">
<h3 id="org2040994">Mac OSX and Windows</h3>
<div class="outline-text-3" id="text-org2040994">
<blockquote>
<p>
Some instructions on installing R and knitr must be missing. This
......
......@@ -5,17 +5,16 @@
#+STARTUP: overview indent
#+OPTIONS: num:nil toc:t
If you have never used git with Rstudio, *we strongly advise that you
follow the [[https://swcarpentry.github.io/git-novice/14-supplemental-rstudio/index.html][step-by-step explanations from Software Carpentry]]*. It comes
with many screenshots and is quite progressive. Alternatively, you
may want to watch this video:
#+BEGIN_EXPORT html
<iframe width="854" height="480" src="https://www.youtube.com/embed/uHYcDQDbMY8" frameborder="0" allow="autoplay; encrypted-media" allowfullscreen></iframe>
#+END_EXPORT
follow [[https://youtu.be/mThPqRH9tmA][our tutorial on using git from Rstudio]]* (in
French). Alternatively, you may want to watch [[https://www.youtube.com/embed/uHYcDQDbMY8][this video]] (in
English). If you do not like videos, you should have a look at the
[[https://swcarpentry.github.io/git-novice/14-supplemental-rstudio/index.html][step-by-step explanations from Software Carpentry]]. It comes with many
screenshots and is quite progressive.
The next sections provide information on how to install Rstudio. Before
proceeding, make sure you have read the "Git and GitLab" instructions.
The next sections provide information on how to install
Rstudio. Before proceeding, make sure you have followed the [[https://youtu.be/LR6gRpmHWx0]["Git and
GitLab" tutorial]] from the 4th sequence of the 2nd module.
Finally, you need to know that the Rstudio team has created a lot of
very good material and tutorials. You should definitively look at the
......
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